Publications

All publications

Selected publications

The Single-Cell Pathology Landscape of Breast Cancer
Jackson HW, Fischer JR, Zanotelli VRT, Ali HR, Mechera R, Soysal SD, Moch H, Muenst S, Varga Z, Weber WP, Bodenmiller B
Nature (2020). https://doi.org/10.1038/s41586-019-1876-x

A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer.
Wagner J, Rapsomaniki MA, Chevrier S, Anzeneder T, Langwieder C, Dykgers A, Rees M, Ramaswamy A, Muenst S, Soysal SD, Jacobs A, Windhager J, Silina K, van den Broek M, Dedes KJ, Rodríguez Martínez M, Weber WP, Bodenmiller B
Cell. 2019 Apr 10. pii: S0092-8674(19)30267-3. doi: 10.1016/j.cell.2019.03.005.

An Immune Atlas of Clear Cell Renal Cell Carcinoma.
Chevrier S, Levine JH, Zanotelli VRT, Silina K, Schulz D, Bacac M, Ries CH, Ailles L, Jewett MAS, Moch H, van den Broek M, Beisel C, Stadler MB, Gedye C, Reis B, Pe’er D, Bodenmiller B
Cell. 2017 May 4;169(4):736-749.e18. doi: 10.1016/j.cell.2017.04.016.

Influence of Node Abundance on Signaling Network State and Dynamics Analyzed by Mass cytometry.
Lun XK, Zanotelli VRT, Wade JD, Schapiro D, Tognetti M, Dobberstein N, Bodenmiller B
Nature Biotechnology. 2017 Feb;35(2):164-172. doi: 10.1038/nbt.3770.

HistoCAT: Analysis of Cell Phenotypes and Interactions in Multiplex Image Cytometry Data.
Schapiro D, Jackson HW, Raghuraman S, Fischer JR, Zanotelli VRT, Schulz D, Giesen C, Catena R, Varga Z, Bodenmiller B
Nature Methods. 2017 Aug 7. doi: 10.1038/nmeth.4391.

Highly Multiplexed Imaging of Tumor Tissues with Subcellular Resolution by Mass Cytometry.
Giesen C, Wang HAO, Schapiro D, Zivanovic N, Jacobs A, Hattendorf B, Schüffler PJ, Grolimund D, Buhmann JM, Brandt S, Varga Z, Wild PJ, Günther D and Bodenmiller B
Nature Methods. 2014 Apr; 11(4):417-22.

Imaging Mass Cytometry Analysis of the Natural History of Type 1 Diabetes.
Damond N, Engler S, Zanotelli VRT, Schapiro D, Wasserfall CH, Kusmartseva I, Nick HS, Thorel F, Herrera PL, Atkinson MA, Bodenmiller B
Cell Metabolism. 2019 Mar 5;29(3):755-768.e5. doi: 10.1016/j.cmet.2018.11.014.

Analysis of the Human Kinome and Phosphatome Reveals Diseased Signaling Networks Induced by Overexpression.
Lun XK, Szklarczyk D, Gábor A, Dobberstein N, Zanotelli VRT, Saez-Rodriguez J, von Mering C and Bodenmiller B
Molecular Cell. 2019 Jun 6; 74(5): 1086–1102.

Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass Cytometry.
Schulz D, Zanotelli VRT, Fischer JR, Schapiro D, Engler S, Lun XK, Jackson HW, Bodenmiller B
Cell Systems. 2018 Jan 24;6(1):25-36.e5.

Compensation of Signal Spillover in Suspension and Imaging Mass Cytometry.
Chevrier S, Crowell HL, Zanotelli VRT, Engler S, Robinson MD, Bodenmiller B
Cell Systems. 2018 Mar 23. pii: S2405-4712(18)30063-2.